Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015794995.1_cds_XP_016441871.1_3633
CDS Infomation

[gene=LOC107767387] [db_xref=GeneID:107767387] [protein=zinc finger protein ZPR1-like] [protein_id=XP_016441871.1] [location=complement(join(23356..23480,24058..24163,24493..24584,24988..25096,28121..28210,28287..28357,29011..29077,29158..29425,31200..31327,31425..31484,31660..31716,31948..31992,34408..34489,34590..34630,35016..35060,35599..35625))] [gbkey=CDS]
Sequence

ATGGAAGGAAAGGAAAAGGAATCAGCAGGTACAACAAGGTTTCTCTTAACACTGATTCCA
CATTTTAGAAAGATATTATTGTCAGCATTTGACTGCCCACATTGTAGTGAAAGAAATAAT
GAAGTGGAGTTCGCTGGTGAAATTCAGCCTCGAGGATGTTGCTATAGCTTGCATATTCCA
TCAGGTGATCAAAAGATGCTCGACCGAACGGTTGTGAAGTCTGAAAGTGCTACCATCAAG
ATCCCTGAACTGGATTTTGAGATCCCCCCCGAGGCTCAGCGTGGATCGTTGTCAACGGTA
GAAGGCATACTGGTTCGAGCTGCCGACGGTTTGGAGGCCCTTCAAGATGAACGGAAGAAA
GTGGATCCCCAGATGGCTGAAGCAATAGATCGGTTCTTGATAAAACTGAGAGCTTGTGCT
TCAGGAGATTCATCCTTTACTTTCATTCTTGATGATCCTGCTGGTAACAGCTTTATTGAG
AACCCGTTAGCTCCATCTCCTGATCCCTCATTGAAAATCACATTCTATGAGCGTACTCCT
GAACAACAGGCAGCTTTAGGGTATCTTGCCGACCCATCACAGCTTGGAGGACAAAGTGAT
GAGGTATCAAGTGAGGGTATAAATAATGTTCCTCATCACCTACTAAAGGAACCACATGGA
TCAGTTGGAGCAAGAGCAGGACGTCAGGCTATTGCTCAGGGTAACAGTGCAGAAATAGCT
GAAGCTCTATTTCGATATTCAGCTCCTGAAGAGGTGATGATGTTTCCATCAACTTGTGGA
GCATGCGCTGCAAGGTGTGACTGTAGAATGTTTGTTACCAATATTCCATATTTTCAAGAA
GTAATAGTTATGGCATCCTCTTGTGATGCTTGTGGTTATCGCAACTCTGAGCTGAAACCT
GGTTGTCCTATATCTGATAAGGGAAAGAAAATTACGCTTCATGTGGAAAACATTAAAGAC
TTAAGCCGTGATGTGATTAAGTCTGATAGTGCTGGAGTGGAAATTCCTGAGCTTGAGTTA
GAGCTTGCTAGTGGCACTTTGGGTGGAATGGTGACGACAGTTGAGGGTCTAATCACAAAA
ATTAGCGAAAGTCTTGAGAGAGTACATGGATTCACATTTGGAGACAGTCTTGATGAAGAC
AGGAAGAGCAAGTGGTTGGACTTCCGAGCAAGACTAGACAAGCTTTTGAGCTTGGGACAA
CCGTGGACATTGATCATCGACGATGCACTTTCAAATTCCTTTGTTGCACCTGCAACCGAT
GACATCAAGGATGACAAACAGTTAACATTTGAAGAGTATGTGAGGTCGTGGGAGCAGAAC
GAGGAGTTGGGTCTTAATGACATGGACACAACCTCGGCTGATGCTGCTTACGGTTCAGCA
GATGCTGCACCCAGTGAGAGAGCTGACAATTGA

Peptide Sequence

PEP ID

XP_016441871.1
PEP Infomation

PREDICTED: zinc finger protein ZPR1-like [Nicotiana tabacum]
Sequence

MEGKEKESAGTTRFLLTLIPHFRKILLSAFDCPHCSERNNEVEFAGEIQPRGCCYSLHIP
SGDQKMLDRTVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILVRAADGLEALQDERKK
VDPQMAEAIDRFLIKLRACASGDSSFTFILDDPAGNSFIENPLAPSPDPSLKITFYERTP
EQQAALGYLADPSQLGGQSDEVSSEGINNVPHHLLKEPHGSVGARAGRQAIAQGNSAEIA
EALFRYSAPEEVMMFPSTCGACAARCDCRMFVTNIPYFQEVIVMASSCDACGYRNSELKP
GCPISDKGKKITLHVENIKDLSRDVIKSDSAGVEIPELELELASGTLGGMVTTVEGLITK
ISESLERVHGFTFGDSLDEDRKSKWLDFRARLDKLLSLGQPWTLIIDDALSNSFVAPATD
DIKDDKQLTFEEYVRSWEQNEELGLNDMDTTSADAAYGSADAAPSERADN

Transcript Sequence

Gene sequence data has not been registered.